| #410 |
REST based interface for Annotations, Users, Journals, Issues. |
amit |
None |
critical |
enhancement |
|
06/20/07 |
| #515 |
develop a proper way to include freemarker templates on a per virtual journal basis |
stevec |
None |
critical |
defect |
|
07/31/07 |
| #653 |
trackback spam filter is too conservative |
russ |
|
critical |
enhancement |
|
09/20/07 |
| #675 |
Admin application needs to handle journals better. |
amit |
|
critical |
enhancement |
jsuttor * |
10/01/07 |
| #724 |
automate volume/issue collections on ingest |
rich |
|
critical |
task |
jsuttor |
12/17/07 |
| #744 |
Advanced Search - Lucene / Mulgara |
rich |
|
critical |
task |
|
01/07/08 |
| #854 |
Ambra Webapp Integration Tests |
amit |
|
critical |
defect |
|
03/19/08 |
| #910 |
Fix and rework user handling |
ronald |
|
critical |
defect |
|
04/14/08 |
| #919 |
support external template sets |
russ |
|
critical |
enhancement |
amit |
04/23/08 |
| #926 |
global default journal - get rid of requirement to configure overlay journal |
russ |
|
critical |
enhancement |
pradeep |
05/01/08 |
| #972 |
standardize parameter names for actions |
russ |
|
critical |
task |
|
06/19/08 |
| #995 |
article-state cache key is not cleared when article is published |
russ |
0.9.1 |
critical |
clarification |
russ |
07/22/08 |
| #66 |
Wiki page to articles for various interesting applications (RDF Abstract, language translation, etc.) |
amit |
None |
high |
enhancement |
rich |
06/14/06 |
| #418 |
Update Annotation data model (After #357 is done) |
pradeep |
0.9.1 |
high |
defect |
rich |
06/20/07 |
| #605 |
return user to origination journal after createNewUser or editProfile |
russ |
None |
high |
enhancement |
jsuttor * |
08/24/07 |
| #614 |
Email address(es) specified for correspondence with article's creators is not being migrated or ingested |
ebrown |
|
high |
task |
rich |
08/27/07 |
| #640 |
annotations in the paragraphs following equations are placed incorrectly |
russ |
|
high |
defect |
|
09/18/07 |
| #690 |
pull image attribution info from the cover image article and display on TOC page |
russ |
|
high |
enhancement |
rich |
10/11/07 |
| #717 |
add plos article type, related articles to feed, add group by article type sorting option |
russ |
|
high |
enhancement |
jsuttor |
12/10/07 |
| #725 |
configurable rating categories by article type |
rich |
|
high |
enhancement |
jsuttor |
12/17/07 |
| #729 |
article is missing from feed, but shows up in browse list |
russ |
0.9.1 |
high |
clarification |
jkirton |
12/20/07 |
| #783 |
Correction annotations outside of <body> element. |
rich |
|
high |
task |
jkirton |
02/11/08 |
| #814 |
feeds are slow |
russ |
0.9.1 |
high |
defect |
rich |
03/03/08 |
| #842 |
Download Citation page citation need better formatting |
rich |
|
high |
defect |
jkirton * |
03/13/08 |
| #869 |
Browse by Date: use most recent pub date as the endDate for "past week", "past month", and "past 3 months" |
russ |
|
high |
task |
|
03/25/08 |
| #870 |
annotation in numbered list messes up formatting |
russ |
|
high |
defect |
jkirton * |
03/25/08 |
| #916 |
Define a naming convention for Model classes and rename all Model classes |
pradeep |
|
high |
task |
|
04/19/08 |
| #931 |
extend cascading file lookup filter to freemarker templates |
russ |
|
high |
enhancement |
|
05/06/08 |
| #945 |
support article packages >4GB in size |
russ |
|
high |
enhancement |
amit |
05/28/08 |
| #981 |
'see all ratings' needs paging |
pradeep |
|
high |
enhancement |
stoomey * |
07/08/08 |
| #996 |
disallow text selection based article annotations for text adjacent to figures and tables |
jkirton |
|
high |
defect |
jkirton |
07/23/08 |
| #1016 |
if feed argument extended=true, then no result is returned when feed is cached |
russ |
0.9.1 |
high |
defect |
rich |
08/20/08 |
| #104 |
Handling different forms of copyright |
amit |
None |
medium |
defect |
rich |
08/02/06 |
| #420 |
logging: bad article ID should give 404, not site error |
russ |
None |
medium |
enhancement |
jsuttor |
06/22/07 |
| #502 |
Add references (cited articles etc.) to the article feed data |
russ |
|
medium |
enhancement |
jsuttor * |
07/25/07 |
| #509 |
footnote links for figures with footnotes don't work (also, footnote links are showing the rid instead of the footnote) |
russ |
None |
medium |
defect |
rich |
07/27/07 |
| #517 |
group author name missing from "email this article" template |
russ |
None |
medium |
defect |
jsuttor |
08/01/07 |
| #520 |
Line wrap for lengthy gene sequences |
susanne |
None |
medium |
enhancement |
alex |
08/02/07 |
| #539 |
Journal definition via a XML file. |
amit |
None |
medium |
task |
rich |
08/13/07 |
| #565 |
browse pages should have a feedicon and link to the feed as well as a feed link in <head> |
russ |
|
medium |
enhancement |
russ * |
08/17/07 |
| #593 |
group authors do not show up in feed |
russ |
|
medium |
defect |
alex |
08/22/07 |
| #600 |
handle multiple abstracts correctly on ingest |
stevec |
|
medium |
task |
rich |
08/22/07 |
| #641 |
bad behavior when user tries to annotate in acknowledgement section illegal area |
russ |
|
medium |
defect |
jsuttor |
09/18/07 |
| #715 |
group author name missing from citation download |
russ |
|
medium |
defect |
jkirton |
12/06/07 |
| #718 |
PLoS webapp should register a TemplateExceptionHandler to avoid Exception traces as Results in Templates |
jsuttor |
|
medium |
defect |
jsuttor |
12/11/07 |
| #745 |
caching improvements for feeds |
russ |
0.9.1 |
medium |
clarification |
rich |
01/08/08 |
| #785 |
Migrate Formal Correction Header HTML markup assembly from javascript to viewnlm-v2.xsl |
jkirton |
|
medium |
task |
jkirton |
02/13/08 |
| #787 |
retraction annotation |
rich |
|
medium |
task |
jkirton |
02/14/08 |
| #858 |
cache search |
russ |
|
medium |
enhancement |
jsuttor * |
03/20/08 |
| #859 |
placing a note directly on a reference link breaks the link |
russ |
|
medium |
defect |
jkirton |
03/20/08 |
| #875 |
RH nav bar too long for page if article contains many sections |
russ |
|
medium |
defect |
amit |
03/25/08 |
| #913 |
odd behavior in admin on deleting/readding issues |
russ |
0.9.1 |
medium |
task |
russ |
04/17/08 |
| #930 |
handle site-wide overrides |
russ |
|
medium |
enhancement |
|
05/06/08 |
| #932 |
Roll back r5648 after move to JDK 1.6 |
amit |
0.9.1 |
medium |
task |
|
05/06/08 |
| #934 |
admin/findUser.action "Find User by Id" form needs updating |
russ |
0.9.1 |
medium |
task |
alex |
05/07/08 |
| #940 |
Verify that ambra-theme is up to date and also only maintain copies of what we changed, |
pradeep |
|
medium |
task |
alex |
05/15/08 |
| #946 |
support very large assets (supporting info, etc.) |
russ |
|
medium |
enhancement |
amit |
05/28/08 |
| #971 |
there are "note" annotations in production with state 0 |
russ |
0.9.1 |
medium |
defect |
pradeep |
06/18/08 |
| #979 |
display total number of search results |
russ |
|
medium |
task |
|
06/26/08 |
| #982 |
Add HTTP exires header to served static resources |
jkirton |
|
medium |
enhancement |
russ |
07/09/08 |
| #990 |
Invalid annotation URI supplied to listReplyAction |
pradeep |
|
medium |
defect |
jkirton * |
07/17/08 |
| #1007 |
article "linkback" URL on listThread.action uses deprecated fetchArticle.action format |
russ |
|
medium |
defect |
rich |
08/11/08 |
| #1019 |
note range select bug in firefox 3.0 |
russ |
|
medium |
defect |
rich |
08/27/08 |
| #402 |
XSL transform of RA abstracts with subsections |
rich |
|
low |
enhancement |
stoomey * |
06/18/07 |
| #512 |
Publishing Application does not create deceased footnote when <contrib> element has deceased="yes" attribute |
russ |
None |
low |
enhancement |
alex |
07/30/07 |
| #564 |
browse by subject pages should include the main feed as well as the subject feed in the <head> section |
russ |
|
low |
enhancement |
jsuttor |
08/17/07 |
| #567 |
add 'delete' button to editAnnotation page |
russ |
|
low |
enhancement |
jsuttor |
08/17/07 |
| #719 |
dynamic title for browseIssue |
russ |
|
low |
task |
alex |
12/14/07 |
| #741 |
Struts 2 URLHelper bug |
rich |
|
low |
defect |
jkirton |
01/02/08 |
| #746 |
fix lazy loading browse cache without losing related performance gains |
russ |
|
low |
enhancement |
amit |
01/08/08 |
| #929 |
move freemarker templates out of WEB-INF/pages |
russ |
0.9.1 |
low |
task |
russ |
05/06/08 |
| #997 |
Update javascript [dojo] in the ambra/registration/webapp project |
jkirton |
|
low |
defect |
jkirton |
07/23/08 |
| #1020 |
when editing a user through the admin pages, user cache is not cleared for logged in user |
russ |
|
low |
defect |
rich |
08/29/08 |
| #89 |
Prevent as far as possible automated registration of users. |
amit |
None |
unassigned |
task |
rich |
07/25/06 |
| #124 |
Write a new alert service |
ebrown |
None |
unassigned |
defect |
jsuttor |
08/11/06 |
| #145 |
Implement profile access-control tests |
ronald |
|
unassigned |
defect |
alex |
08/26/06 |
| #159 |
xmlns(x=foo) is broken in xpointer lib |
pradeep |
None |
unassigned |
defect |
rich |
09/08/06 |
| #182 |
CAS email lookup service needs to be secured |
stevec |
None |
unassigned |
defect |
rich |
10/02/06 |
| #225 |
Support different languages in search |
ebrown |
None |
unassigned |
defect |
rich |
11/27/06 |
| #492 |
should configure struts2 http (and https) port properties |
stevec |
None |
unassigned |
enhancement |
alex |
07/19/07 |
| #516 |
update XSL file to 2.0 |
stevec |
None |
unassigned |
enhancement |
rich |
07/31/07 |
| #781 |
findArticle.action constructs invalid pubmed search URLs in some cases |
russ |
|
unassigned |
defect |
jsuttor |
02/07/08 |
| #867 |
provide a link to annotated article in admin list of flagged comments |
russ |
|
unassigned |
unassigned |
jsuttor |
03/25/08 |
| #871 |
Admin interface to change a user's password |
russ |
|
unassigned |
enhancement |
jsuttor |
03/25/08 |
| #872 |
discussion thread: too many RE:'s |
russ |
|
unassigned |
enhancement |
jsuttor |
03/25/08 |
| #889 |
allow admin to set volume and issue of formal correction note |
russ |
|
unassigned |
enhancement |
rich |
04/02/08 |
| #899 |
extend DOI resolver to handle supplementary-material |
rich |
|
unassigned |
enhancement |
jsuttor |
04/04/08 |
| #911 |
"First" concept for representations is bogus. Replace with something else. |
pradeep |
0.9.1 |
unassigned |
defect |
|
04/15/08 |
| #927 |
use overlay journal name as title of admin pages |
russ |
|
unassigned |
task |
russ |
05/01/08 |
| #985 |
it is impossible to remove all issues from a volume |
russ |
|
unassigned |
defect |
rich |
07/09/08 |
| #987 |
Annotation display messed up |
ronald |
|
unassigned |
defect |
jkirton |
07/17/08 |
| #1006 |
it's bad to have ambra.virtualJournals.JournalName.url defined in template |
russ |
|
unassigned |
defect |
russ |
08/01/08 |
| #1009 |
add PMC article-type to extended feed |
russ |
|
unassigned |
task |
rich |
08/12/08 |
| #1010 |
add article type restriction to home page recent article block |
russ |
|
unassigned |
task |
rich |
08/12/08 |
| #1014 |
correction citation format should match article citation format |
russ |
0.9.1 |
unassigned |
defect |
rich |
08/15/08 |
| #1015 |
include issn in extended feed |
russ |
|
unassigned |
task |
rich |
08/20/08 |
| #1017 |
cache keys for extended feeds invert the setting |
russ |
|
unassigned |
defect |
rich |
08/20/08 |
