| #515 |
develop a proper way to include freemarker templates on a per virtual journal basis |
ambra |
0.9-SNAPSHOT |
None |
defect |
|
07/31/07 |
| #410 |
REST based interface for Annotations, Users, Journals, Issues. |
ambra |
0.7 |
None |
enhancement |
|
06/20/07 |
| #854 |
Ambra Webapp Integration Tests |
ambra |
0.8.3-SNAPSHOT |
|
defect |
|
03/19/08 |
| #910 |
Fix and rework user handling |
ambra |
0.9-SNAPSHOT |
|
defect |
|
04/14/08 |
| #653 |
trackback spam filter is too conservative |
ambra |
0.8.2-SNAPSHOT |
|
enhancement |
|
09/20/07 |
| #675 |
Admin application needs to handle journals better. |
ambra |
0.8 |
|
enhancement |
jsuttor * |
10/01/07 |
| #919 |
support external template sets |
ambra |
0.9-SNAPSHOT |
|
enhancement |
amit |
04/23/08 |
| #926 |
global default journal - get rid of requirement to configure overlay journal |
ambra |
0.9-SNAPSHOT |
|
enhancement |
pradeep |
05/01/08 |
| #538 |
Text for copyright statement associated with PLoS feeds in the publishing applicaiton. |
legal |
0.8 |
|
task |
rich |
08/13/07 |
| #724 |
automate volume/issue collections on ingest |
ambra |
|
|
task |
jsuttor |
12/17/07 |
| #744 |
Advanced Search - Lucene / Mulgara |
ambra |
0.9-SNAPSHOT |
|
task |
|
01/07/08 |
| #972 |
standardize parameter names for actions |
ambra |
0.9-SNAPSHOT |
|
task |
|
06/19/08 |
| #995 |
article-state cache key is not cleared when article is published |
ambra |
0.9-rc1 |
0.9.1 |
clarification |
russ |
07/22/08 |
| #1004 |
related articles not displaying in plosgenetics |
ambra |
0.9-rc2-SNAPSHOT |
0.9.1 |
defect |
rich |
08/01/08 |
| #780 |
Support for Java 'generics'. |
topaz |
0.8.3-SNAPSHOT |
0.9.1 |
enhancement |
pradeep |
02/04/08 |
| #175 |
ensure uniqueness of display-names |
topaz |
0.5-SNAPSHOT |
None |
defect |
pradeep |
09/25/06 |
| #467 |
Remove Publishing application RDF dependency on Topaz URI RDF namespace. |
information-model |
0.7 |
None |
defect |
amit |
07/09/07 |
| #66 |
Wiki page to articles for various interesting applications (RDF Abstract, language translation, etc.) |
ambra |
|
None |
enhancement |
rich |
06/14/06 |
| #69 |
Provide more info to policy in article access-control |
security |
|
None |
enhancement |
ronald |
06/18/06 |
| #345 |
Move Plos Registration database to Mulgara |
ambra-sso |
|
None |
enhancement |
amit |
05/28/07 |
| #605 |
return user to origination journal after createNewUser or editProfile |
ambra |
0.8 |
None |
enhancement |
jsuttor * |
08/24/07 |
| #57 |
Create a group profile service. get/set/list profile info for user groups. |
topaz |
|
None |
task |
pradeep |
06/01/06 |
| #407 |
push email change through to mulgara in emailConfirmationSuccess.action - do not require user to logout and then log back in to propagate change to mulgara |
ambra-sso |
0.7 |
|
defect |
|
06/19/07 |
| #640 |
annotations in the paragraphs following equations are placed incorrectly |
ambra |
0.8 |
|
defect |
|
09/18/07 |
| #842 |
Download Citation page citation need better formatting |
ambra |
0.8.2.1 |
|
defect |
jkirton * |
03/13/08 |
| #870 |
annotation in numbered list messes up formatting |
ambra |
0.8.2.1 |
|
defect |
jkirton * |
03/25/08 |
| #996 |
disallow text selection based article annotations for text adjacent to figures and tables |
ambra |
|
|
defect |
jkirton |
07/23/08 |
| #630 |
Masthead questions |
information-model |
0.8 |
|
enhancement |
rich |
09/05/07 |
| #690 |
pull image attribution info from the cover image article and display on TOC page |
ambra |
0.8 |
|
enhancement |
rich |
10/11/07 |
| #717 |
add plos article type, related articles to feed, add group by article type sorting option |
ambra |
0.8.1 |
|
enhancement |
jsuttor |
12/10/07 |
| #725 |
configurable rating categories by article type |
ambra |
0.8.2-SNAPSHOT |
|
enhancement |
jsuttor |
12/17/07 |
| #820 |
Use ontologies to store content model info and have references to them from ClassMetadata etc. |
topaz |
0.8.3-SNAPSHOT |
|
enhancement |
pradeep |
03/04/08 |
| #931 |
extend cascading file lookup filter to freemarker templates |
ambra |
0.9-SNAPSHOT |
|
enhancement |
|
05/06/08 |
| #945 |
support article packages >4GB in size |
ambra |
0.9-SNAPSHOT |
|
enhancement |
amit |
05/28/08 |
| #981 |
'see all ratings' needs paging |
ambra |
0.9-SNAPSHOT |
|
enhancement |
stoomey * |
07/08/08 |
| #989 |
Add an @Reference or @Predicate(ref=...) annotation to denote references for "usage-models" |
topaz |
0.9-rc1 |
|
enhancement |
pradeep |
07/17/08 |
| #614 |
Email address(es) specified for correspondence with article's creators is not being migrated or ingested |
ambra |
0.8 |
|
task |
rich |
08/27/07 |
| #783 |
Correction annotations outside of <body> element. |
ambra |
0.8.2.1 |
|
task |
jkirton |
02/11/08 |
| #869 |
Browse by Date: use most recent pub date as the endDate for "past week", "past month", and "past 3 months" |
ambra |
0.8.2.1 |
|
task |
|
03/25/08 |
| #916 |
Define a naming convention for Model classes and rename all Model classes |
ambra |
0.9-SNAPSHOT |
|
task |
|
04/19/08 |
| #729 |
article is missing from feed, but shows up in browse list |
ambra |
0.8.1 |
0.9.1 |
clarification |
jkirton |
12/20/07 |
| #765 |
Change name and usage from 'model' to graph name and similar attribute for blob. |
topaz |
0.8.2-SNAPSHOT |
0.9.1 |
clarification |
pradeep |
01/21/08 |
| #418 |
Update Annotation data model (After #357 is done) |
ambra |
0.8 |
0.9.1 |
defect |
rich |
06/20/07 |
| #440 |
Rating content model need fixing. |
information-model |
0.7 |
0.9.1 |
defect |
ronald |
07/04/07 |
| #441 |
Replies content model needs fixing. |
information-model |
0.7 |
0.9.1 |
defect |
pradeep |
07/04/07 |
| #818 |
Change the Embedded class concept: instead of treating them as values ala Hibernate, treat them as Entities too. |
topaz |
0.8.3-SNAPSHOT |
0.9.1 |
enhancement |
pradeep |
03/04/08 |
| #819 |
Criteria should allow childCriteria() creation for embedded classes in addition to using '.' as a separator. |
topaz |
0.8.3-SNAPSHOT |
0.9.1 |
enhancement |
pradeep |
03/04/08 |
| #104 |
Handling different forms of copyright |
ambra |
0.5-SNAPSHOT |
None |
defect |
rich |
08/02/06 |
| #509 |
footnote links for figures with footnotes don't work (also, footnote links are showing the rid instead of the footnote) |
ambra |
0.7 |
None |
defect |
rich |
07/27/07 |
| #517 |
group author name missing from "email this article" template |
ambra |
0.7 |
None |
defect |
jsuttor |
08/01/07 |
| #420 |
logging: bad article ID should give 404, not site error |
ambra |
0.7 |
None |
enhancement |
jsuttor |
06/22/07 |
| #520 |
Line wrap for lengthy gene sequences |
ambra |
0.8 |
None |
enhancement |
alex |
08/02/07 |
| #150 |
Need to track licenses. |
build-system |
0.5-SNAPSHOT |
None |
task |
|
08/29/06 |
| #171 |
Future of standalone libraries within Topaz |
topaz |
0.5-SNAPSHOT |
None |
task |
amit |
09/20/06 |
| #421 |
Upgrade CAS to 3.1 |
ambra-sso |
0.7 |
None |
task |
pradeep |
06/22/07 |
| #539 |
Journal definition via a XML file. |
ambra |
0.8 |
None |
task |
rich |
08/13/07 |
| #593 |
group authors do not show up in feed |
ambra |
0.7 |
|
defect |
alex |
08/22/07 |
| #641 |
bad behavior when user tries to annotate in acknowledgement section illegal area |
ambra |
0.8 |
|
defect |
jsuttor |
09/18/07 |
| #715 |
group author name missing from citation download |
ambra |
0.8.1 |
|
defect |
jkirton |
12/06/07 |
| #718 |
PLoS webapp should register a TemplateExceptionHandler to avoid Exception traces as Results in Templates |
ambra |
0.8.2-SNAPSHOT |
|
defect |
jsuttor |
12/11/07 |
| #859 |
placing a note directly on a reference link breaks the link |
ambra |
0.8.2.1 |
|
defect |
jkirton |
03/20/08 |
| #875 |
RH nav bar too long for page if article contains many sections |
ambra |
0.8.2.1 |
|
defect |
amit |
03/25/08 |
| #976 |
IE6: Login page is too wide - missing fixed width |
ambra-sso |
0.8.2.1 |
|
defect |
jkirton |
06/24/08 |
| #990 |
Invalid annotation URI supplied to listReplyAction |
ambra |
0.9-rc1 |
|
defect |
jkirton * |
07/17/08 |
| #1007 |
article "linkback" URL on listThread.action uses deprecated fetchArticle.action format |
ambra |
0.9-rc2-SNAPSHOT |
|
defect |
rich |
08/11/08 |
| #462 |
Create a filter framework to allow for 'smart' collection of objects. |
topaz |
0.8 |
|
enhancement |
ronald |
07/06/07 |
| #502 |
Add references (cited articles etc.) to the article feed data |
ambra |
0.7 |
|
enhancement |
jsuttor * |
07/25/07 |
| #565 |
browse pages should have a feedicon and link to the feed as well as a feed link in <head> |
ambra |
0.8 |
|
enhancement |
russ * |
08/17/07 |
| #778 |
Developer friendly mechanism for discovering annotated classes. |
topaz |
0.8.3-SNAPSHOT |
|
enhancement |
pradeep |
01/31/08 |
| #821 |
Restrictions as sub-classes |
topaz |
0.8.3-SNAPSHOT |
|
enhancement |
pradeep |
03/04/08 |
| #823 |
Support tx recovery in OTM for local transactions |
topaz |
0.8.3-SNAPSHOT |
|
enhancement |
ronald |
03/04/08 |
| #858 |
cache search |
ambra |
0.8.2.1 |
|
enhancement |
jsuttor * |
03/20/08 |
| #930 |
handle site-wide overrides |
ambra |
0.9-SNAPSHOT |
|
enhancement |
|
05/06/08 |
| #946 |
support very large assets (supporting info, etc.) |
ambra |
0.9-SNAPSHOT |
|
enhancement |
amit |
05/28/08 |
| #982 |
Add HTTP exires header to served static resources |
ambra |
|
|
enhancement |
russ |
07/09/08 |
| #600 |
handle multiple abstracts correctly on ingest |
ambra |
0.8 |
|
task |
rich |
08/22/07 |
| #785 |
Migrate Formal Correction Header HTML markup assembly from javascript to viewnlm-v2.xsl |
ambra |
0.8.2.1-SNAPSHOT |
|
task |
jkirton |
02/13/08 |
| #787 |
retraction annotation |
ambra |
|
|
task |
jkirton |
02/14/08 |
| #940 |
Verify that ambra-theme is up to date and also only maintain copies of what we changed, |
ambra |
0.9-SNAPSHOT |
|
task |
alex |
05/15/08 |
| #979 |
display total number of search results |
ambra |
0.9-SNAPSHOT |
|
task |
|
06/26/08 |
| #771 |
Add new built-in function for 'type' in OQL and Criteria queries. |
topaz |
0.8.3-SNAPSHOT |
|
unassigned |
ronald |
01/28/08 |
| #745 |
caching improvements for feeds |
ambra |
0.8.2-SNAPSHOT |
0.9.1 |
clarification |
rich |
01/08/08 |
| #971 |
there are "note" annotations in production with state 0 |
ambra |
0.9-rc2-SNAPSHOT |
0.9.1 |
defect |
pradeep |
06/18/08 |
| #913 |
odd behavior in admin on deleting/readding issues |
ambra |
0.8.2.1 |
0.9.1 |
task |
russ |
04/17/08 |
| #932 |
Roll back r5648 after move to JDK 1.6 |
ambra |
0.9-SNAPSHOT |
0.9.1 |
task |
|
05/06/08 |
| #934 |
admin/findUser.action "Find User by Id" form needs updating |
ambra |
0.8.2.2-SNAPSHOT |
0.9.1 |
task |
alex |
05/07/08 |
| #939 |
New tests in OTM needed for Interceptor |
topaz |
0.9-SNAPSHOT |
0.9.1 |
task |
pradeep |
05/12/08 |
| #531 |
redirect to login page at https://cas-FQDN/ |
ambra-sso |
0.8 |
None |
defect |
russ * |
08/08/07 |
| #512 |
Publishing Application does not create deceased footnote when <contrib> element has deceased="yes" attribute |
ambra |
0.7 |
None |
enhancement |
alex |
07/30/07 |
| #741 |
Struts 2 URLHelper bug |
ambra |
|
|
defect |
jkirton |
01/02/08 |
| #997 |
Update javascript [dojo] in the ambra/registration/webapp project |
ambra |
0.9-rc2-SNAPSHOT |
|
defect |
jkirton |
07/23/08 |
| #402 |
XSL transform of RA abstracts with subsections |
ambra |
0.8.2-SNAPSHOT |
|
enhancement |
stoomey * |
06/18/07 |
| #564 |
browse by subject pages should include the main feed as well as the subject feed in the <head> section |
ambra |
0.8 |
|
enhancement |
jsuttor |
08/17/07 |
| #567 |
add 'delete' button to editAnnotation page |
ambra |
0.8 |
|
enhancement |
jsuttor |
08/17/07 |
| #746 |
fix lazy loading browse cache without losing related performance gains |
ambra |
0.8.2-SNAPSHOT |
|
enhancement |
amit |
01/08/08 |
| #719 |
dynamic title for browseIssue |
ambra |
0.8.2-SNAPSHOT |
|
task |
alex |
12/14/07 |
| #775 |
mulgara connects to pub-app on random high port for ehcache, should use specified port 8111 |
topaz-mulgara |
0.8.3-SNAPSHOT |
0.9.1 |
task |
ronald |
01/30/08 |
| #929 |
move freemarker templates out of WEB-INF/pages |
ambra |
0.9-SNAPSHOT |
0.9.1 |
task |
russ |
05/06/08 |
| #124 |
Write a new alert service |
ambra |
0.8 |
None |
defect |
jsuttor |
08/11/06 |
| #159 |
xmlns(x=foo) is broken in xpointer lib |
ambra |
0.5-SNAPSHOT |
None |
defect |
rich |
09/08/06 |
| #182 |
CAS email lookup service needs to be secured |
ambra |
0.5-SNAPSHOT |
None |
defect |
rich |
10/02/06 |
| #186 |
Topaz should handle users authenticated from multiple signon registries |
topaz |
0.5-SNAPSHOT |
None |
defect |
|
10/02/06 |
| #191 |
Fix handling of fedora exceptions |
topaz-fedora |
0.8.2-SNAPSHOT |
None |
defect |
|
10/06/06 |
| #225 |
Support different languages in search |
ambra |
0.5-SNAPSHOT |
None |
defect |
rich |
11/27/06 |
| #494 |